Gene: OB12G23330 (Oryza brachyantha)

Overview top

Gene Identifier
OB12G23330
Transcript Identifier
OB12G23330.1
Gene Type
Coding gene
Location
12 : 12484405-12485703 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Subfamily
ORTHO04M004155
(48 genes in 26 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
myb-like HTH transcriptional regulator family protein

Identifiers

Type Value
logic_namegenemodel_v1.4_oge
tidOB12G23330.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0010338 IEAUniProtleaf formation
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT2G37630
GO:0045088 IEAPLAZA Integrative Orthologyregulation of innate immune responseAT2G37630
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT2G37630
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT2G37630
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT2G37630
GO:0009965 IEAPLAZA Integrative Orthologyleaf morphogenesisAT2G37630
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT2G37630
GO:0009944 IEAPLAZA Integrative Orthologypolarity specification of adaxial/abaxial axisAT2G37630
GO:0009615 IEAPLAZA Integrative Orthologyresponse to virusAT2G37630
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT2G37630
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT2G37630
GO:0008356 IEAPLAZA Integrative Orthologyasymmetric cell divisionAT2G37630
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT2G37630
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT2G37630

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAUniProtDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G37630
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT2G37630
GO:0042803 IEAPLAZA Integrative Orthologyprotein homodimerization activityAT2G37630

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAUniProtnucleus
GO:0000793 IEAPLAZA Integrative Orthologycondensed chromosomeAT2G37630
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G37630

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR031055Protein rough sheath 2/ASYMMETRIC LEAVES1
IPR017930Myb domain
IPR001005SANT/Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.