Gene: OB03G28190 (Oryza brachyantha)

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Gene Identifier
OB03G28190
Transcript Identifier
OB03G28190.1
Gene Type
Coding gene
Location
3 : 12774068-12775858 : positive

Family

Gene family
HOM04M002627
(62 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Uncharacterized protein

Identifiers

Type Value
logic_namegenemodel_v1.4_oge
tidOB03G28190.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006396 IEAInterProRNA processing
GO:0001522 IEAInterPropseudouridine synthesis
GO:0009451 IEAInterProRNA modification

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAInterProRNA binding
GO:0009982 IEAInterPropseudouridine synthase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G57150
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT3G57150
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G57150

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002478PUA domain
IPR004802tRNA pseudouridine synthase B family
IPR012960Dyskerin-like
IPR032819tRNA pseudouridylate synthase B, C-terminal
IPR002501Pseudouridine synthase II, N-terminal
IPR020103Pseudouridine synthase, catalytic domain
IPR015947PUA-like domain
IPR004521Uncharacterised domain CHP00451

Mapman id Description
17.1.1.2.2.1.1.Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.pseudouridine synthase component Nap57/CBF5
No SignalP domains detected for this gene.