Gene: OB01G42380 (Oryza brachyantha)

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Gene Identifier
OB01G42380
Transcript Identifier
OB01G42380.1
Gene Type
Coding gene
Location
1 : 25805837-25813089 : positive

Family

Gene family
HOM04M000051
(1378 genes in 27 species)
specific family
Subfamily
ORTHO04M000043
(822 genes in 27 species)
specific family

Descriptions

Description
Pectinesterase

Identifiers

Type Value
logic_namegenemodel_v1.4_oge
tidOB01G42380.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042545 IEAInterProcell wall modification
GO:0009617 IEAPLAZA Integrative Orthologyresponse to bacteriumAT1G11580

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030599 IEAInterPropectinesterase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618 IEAInterProcell wall
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT1G11580
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G11580

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012334Pectin lyase fold
IPR000070Pectinesterase, catalytic
IPR018040Pectinesterase, Tyr active site
IPR033131Pectinesterase, Asp active site
IPR011050Pectin lyase fold/virulence factor

Mapman id Description
21.3.1.2.1.Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase
No SignalP domains detected for this gene.