Gene: Mapoly0098s0053 (Marchantia polymorpha)

Overview top

Gene Identifier
Mapoly0098s0053
Transcript Identifier
Mapoly0098s0053.1
Gene Type
Coding gene
Location
scaffold_98 : 706024-710611 : negative

Family

Gene family
HOM04M000780
(168 genes in 29 species)
specific family
Subfamily
ORTHO04M006172
(38 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idMapoly0098s0053.v3.1
nameMapoly0098s0053.1
pacid33020990
tidMapoly0098s0053.1.v3.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000373 IEAPLAZA Integrative OrthologyGroup II intron splicingAT1G70070
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G70070
GO:0016441 IEAPLAZA Integrative Orthologyposttranscriptional gene silencingAT1G70070
GO:0006397 IEAPLAZA Integrative OrthologymRNA processingAT1G70070
GO:0010497 IEAPLAZA Integrative Orthologyplasmodesmata-mediated intercellular transportAT1G70070
GO:0006401 IEAPLAZA Homology (enrichment)RNA catabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0005524 IEAInterProATP binding
GO:0003723 IEAPLAZA Integrative OrthologyRNA bindingAT1G70070
GO:0003724 IEAPLAZA Homology (enrichment)RNA helicase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT1G70070
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G70070
GO:0010494 IEAPLAZA Integrative Orthologycytoplasmic stress granuleAT1G70070

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001650Helicase, C-terminal
IPR012961ATP-dependent RNA helicase Ski2, C-terminal
IPR011545DEAD/DEAH box helicase domain
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
16.12.2.1.1.3.RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.RNA helicase (ISE2)
No SignalP domains detected for this gene.