PLAZA 4.0 Monocots gene overview : Mapoly0097s0045

Gene: Mapoly0097s0045 (Marchantia polymorpha)

Overview

Gene Identifier: Mapoly0097s0045
Transcript Identifier: Mapoly0097s0045.3
Gene Type: Coding gene
Location: scaffold_97 : 343062-358331 : negative

Family

Gene family: HOM04M004222
(43 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	Mapoly0097s0045.v3.1
name	Mapoly0097s0045.3
pacid	33009742
tid	Mapoly0097s0045.3.v3.1

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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View

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006260	IEA	InterPro	DNA replication
GO:0006261	IEA	InterPro	DNA-dependent DNA replication
GO:0009933	IEA	PLAZA Integrative Orthology	meristem structural organization	AT4G32700
GO:2000011	IEA	PLAZA Integrative Orthology	regulation of adaxial/abaxial pattern formation	AT4G32700
GO:0010468	IEA	PLAZA Integrative Orthology	regulation of gene expression	AT4G32700
GO:0006310	IEA	PLAZA Integrative Orthology	DNA recombination	AT4G32700
GO:1902749	IEA	PLAZA Integrative Orthology	regulation of cell cycle G2/M phase transition	AT4G32700
GO:0009640	IEA	PLAZA Integrative Orthology	photomorphogenesis	AT4G32700
GO:1990067	IEA	PLAZA Integrative Orthology	intrachromosomal DNA recombination	AT4G32700
GO:0051301	IEA	PLAZA Integrative Orthology	cell division	AT4G32700

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003677	IEA	InterPro	DNA binding
GO:0003887	IEA	InterPro	DNA-directed DNA polymerase activity
GO:0005524	IEA	InterPro	ATP binding

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR012337	Ribonuclease H-like domain
IPR001098	DNA-directed DNA polymerase, family A, palm domain
IPR001650	Helicase, C-terminal
IPR011545	DEAD/DEAH box helicase domain
IPR002298	DNA polymerase A
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
14.2.2	.DNA damage response.DNA repair polymerase activities.DNA polymerase theta (TEB)

No SignalP domains detected for this gene.