Gene: MCO01G208 (Micromonas commoda)

Overview top

Gene Identifier
MCO01G208
Transcript Identifier
MCO01G208.1
Gene Type
Coding gene
Location
Chr_01 : 332306-334111 : negative

Family

Gene family
HOM04M003502
(49 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idPierreAnnot2.00076.3.0.229
namePierreAnnot2.00076
name113199
pacid27399367
tid113199.3.0.229

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006396 IEAInterProRNA processing
GO:0006417 IEAPLAZA Integrative Orthologyregulation of translationAT3G17040
GO:1901918 IEAPLAZA Integrative Orthologynegative regulation of exoribonuclease activityAT3G17040
GO:0006397 IEAPLAZA Integrative OrthologymRNA processingAT3G17040
GO:0009657 IEAPLAZA Integrative Orthologyplastid organizationAT3G17040
GO:0010114 IEAPLAZA Integrative Orthologyresponse to red lightAT3G17040

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0003727 IEAPLAZA Integrative Orthologysingle-stranded RNA bindingAT3G17040
GO:0043621 IEAPLAZA Integrative Orthologyprotein self-associationAT3G17040

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT3G17040
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G17040
GO:0031969 IEAPLAZA Integrative Orthologychloroplast membraneAT3G17040
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT3G17040
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT3G17040

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011990Tetratricopeptide-like helical domain
IPR013026Tetratricopeptide repeat-containing domain
IPR019734Tetratricopeptide repeat
IPR003107HAT (Half-A-TPR) repeat

Mapman id Description
16.12.4.5.RNA processing.organelle machinery.RNA stability.psbH/psbB-transcript stability factor (HCF107)
No SignalP domains detected for this gene.