Gene: MAC09G1312 (Musa acuminata)

Overview top

Gene Identifier
MAC09G1312
Transcript Identifier
MAC09G1312.1
Gene Type
Coding gene
Location
chr4 : 27970996-27972704 : positive

Family

Gene family
HOM04M000649
(196 genes in 29 species)
specific family
Subfamily
ORTHO04M009327
(25 genes in 22 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
nameGSMUA_Achr4G30300_001
tidGSMUA_Achr4T30300_001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006352 IEAInterProDNA-templated transcription, initiation
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0090351 IEAPLAZA Integrative Orthologyseedling developmentAT2G36990
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT2G36990
GO:0071483 IEAPLAZA Integrative Orthologycellular response to blue lightAT2G36990
GO:0071482 IEAPLAZA Integrative Orthologycellular response to light stimulusAT2G36990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0016987 IEAInterProsigma factor activity
GO:0001053 IEAPLAZA Integrative Orthologyplastid sigma factor activityAT2G36990
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G36990

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT2G36990
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT2G36990

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR007630RNA polymerase sigma-70 region 4
IPR007627RNA polymerase sigma-70 region 2
IPR007624RNA polymerase sigma-70 region 3
IPR000943RNA polymerase sigma-70
IPR013324RNA polymerase sigma factor, region 3/4
IPR013325RNA polymerase sigma factor, region 2
IPR014284RNA polymerase sigma-70 like domain

Mapman id Description
15.6.2.1.RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma)
No SignalP domains detected for this gene.