PLAZA 4.0 Monocots gene overview : MAC01G2773

Gene: MAC01G2773 (Musa acuminata)

Overview

Gene Identifier: MAC01G2773
Transcript Identifier: MAC01G2773.1
Gene Type: Coding gene
Location: chrUn_random : 4272101-4272520 : negative

Family

Gene family: HOM04M109473
(orphan gene)
specific family

Descriptions

Description: Hypothetical protein

Identifiers

Type	Value
name	GSMUA_AchrUn_randomG01290_001
tid	GSMUA_AchrUn_randomT01290_001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

No InterPro domains detected for this gene.

Mapman id	Description
11.10.1.1.1	.Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PIP/PIPL-peptide activity.PIP/PIPL-precursor polypeptide

No SignalP domains detected for this gene.