Gene: LOC_Os12g33070 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os12g33070
Transcript Identifier
LOC_Os12g33070.1
Gene Type
Coding gene
Location
Chr12 : 19991426-19994401 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

Description
myb-like DNA-binding domain containing protein, putative, expressed

Identifiers

Type Value
idLOC_Os12g33070.MSUv7.0
pacid33150932
tidLOC_Os12g33070.1.MSUv7.0
tidLOC_Os12g33070.1
RAPOs12g0515300

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030154 IBAUniProtcell differentiation
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter
GO:2000652 IEAPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT3G08500
GO:1901348 IEAPLAZA Integrative Orthologypositive regulation of secondary cell wall biogenesisAT5G12870
GO:0009834 IEAPLAZA Integrative Orthologyplant-type secondary cell wall biogenesisAT5G12870
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT5G12870
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT5G12870
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT3G08500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0044212 IBAUniProttranscription regulatory region DNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G12870

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.