Gene: LOC_Os12g06570 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os12g06570
Transcript Identifier
LOC_Os12g06570.1
Gene Type
Coding gene
Location
Chr12 : 3186847-3190002 : negative

Family

Gene family
HOM04M000198
(472 genes in 28 species)
specific family
Subfamily
ORTHO04M000234
(309 genes in 28 species)
specific family

Descriptions

Description
cyclic nucleotide-gated ion channel, putative, expressed

Identifiers

Type Value
idLOC_Os12g06570.MSUv7.0
pacid33150589
tidLOC_Os12g06570.1.MSUv7.0
tidLOC_Os12g06570.1
RAPOs12g0163100

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006811 IEAInterProion transport
GO:0055085 IEAInterProtransmembrane transport
GO:0006813 IEAInterPropotassium ion transport
GO:0009860 IEAPLAZA Integrative Orthologypollen tube growthAT5G14870
GO:0070588 IEAPLAZA Integrative Orthologycalcium ion transmembrane transportAT5G14870
GO:0006874 IEAPLAZA Integrative Orthologycellular calcium ion homeostasisAT5G14870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005216 IEAInterProion channel activity
GO:0005249 IEAUniProtvoltage-gated potassium channel activity
GO:0005262 IEAPLAZA Integrative Orthologycalcium channel activityAT5G14870

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 RCA, IEAGene OntologymembraneGR_REF:8210
GO:0016021 IEAUniProtintegral component of membrane
GO:0016324 IEAPLAZA Integrative Orthologyapical plasma membraneAT5G14870

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014710RmlC-like jelly roll fold
IPR000595Cyclic nucleotide-binding domain
IPR005821Ion transport domain
IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR018490Cyclic nucleotide-binding-like

Mapman id Description
24.3.2.4.Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)
No SignalP domains detected for this gene.