Gene: LOC_Os12g01820 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os12g01820
Transcript Identifier
LOC_Os12g01820.1
Gene Type
Coding gene
Location
Chr12 : 490788-493207 : positive

Family

Gene family
HOM04M000187
(498 genes in 28 species)
specific family
Subfamily
ORTHO04M000112
(457 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
ATCHX, putative, expressed

Identifiers

Type Value
idLOC_Os12g01820.MSUv7.0
pacid33151374
tidLOC_Os12g01820.1.MSUv7.0
tidLOC_Os12g01820.1
RAPOs12g0109150

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006812 IEAInterProcation transport
GO:0055085 IEAInterProtransmembrane transport
GO:0006885 IEAPLAZA Integrative Orthologyregulation of pHAT2G13620
GO:0010183 IEAPLAZA Integrative Orthologypollen tube guidanceAT2G31910
GO:0071805 IEAPLAZA Integrative Orthologypotassium ion transmembrane transportAT2G30240
GO:0006813 IEAPLAZA Integrative Orthologypotassium ion transportAT2G30240

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0015299 IEAUniProtsolute:proton antiporter activity
GO:0015079 IEAPLAZA Integrative Orthologypotassium ion transmembrane transporter activityAT2G30240

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAUniProtintegral component of membrane
GO:0016020 RCAGene OntologymembraneGR_REF:8210
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT2G30240
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT1G05580
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT2G28180

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR006153Cation/H+ exchanger

Mapman id Description
24.2.8.2.1.Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:monovalent cation antiporter (CHX)
No SignalP domains detected for this gene.