Gene: LOC_Os11g39000 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os11g39000
Transcript Identifier
LOC_Os11g39000.1
Gene Type
Coding gene
Location
Chr11 : 23222994-23224035 : positive

Family

Gene family
HOM04M000827
(161 genes in 24 species)
specific family
Subfamily
ORTHO04M016972
(3 genes in 3 species)
specific family

Descriptions

Description
helix-loop-helix DNA-binding domain containing protein, expressed

Identifiers

Type Value
idLOC_Os11g39000.MSUv7.0
pacid33161683
tidLOC_Os11g39000.1.MSUv7.0
tidLOC_Os11g39000.1
RAPOs11g0603000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0040008 IEAUniProtregulation of growth
GO:0006355 IEAUniProtregulation of transcription, DNA-templated
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0009416 IEAPLAZA Tree-based Orthologyresponse to light stimulusAT1G26945
GO:0009741 IEAPLAZA Tree-based Orthologyresponse to brassinosteroidAT5G39860
GO:0009742 IEAPLAZA Tree-based Orthologybrassinosteroid mediated signaling pathwayAT1G74500
GO:0080113 IEAPLAZA Tree-based Orthologyregulation of seed growthLOC_Os03g07510
GO:0048510 IEAPLAZA Tree-based Orthologyregulation of timing of transition from vegetative to reproductive phaseAT5G39860
GO:0009640 IEAPLAZA Tree-based OrthologyphotomorphogenesisAT5G39860
GO:0009826 IEAPLAZA Tree-based Orthologyunidimensional cell growthAT5G39860
GO:0010086 IEAPLAZA Tree-based Orthologyembryonic root morphogenesisAT1G74500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAUniProtprotein dimerization activity
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT5G39860

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773 IEAPLAZA Tree-based OrthologyvacuoleAT5G15160
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmLOC_Os06g12210
GO:0005634 IEAPLAZA Tree-based OrthologynucleusLOC_Os03g07510

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
No SignalP domains detected for this gene.