Gene: LOC_Os11g01240 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os11g01240
Transcript Identifier
LOC_Os11g01240.1
Gene Type
Coding gene
Location
Chr11 : 136610-138959 : positive

Family

Gene family
HOM04M000381
(299 genes in 28 species)
specific family
Subfamily
ORTHO04M002815
(63 genes in 22 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
IBR domain containing protein, expressed

Identifiers

Type Value
idLOC_Os11g01240.MSUv7.0
pacid33160437
tidLOC_Os11g01240.1.MSUv7.0
tidLOC_Os11g01240.1
RAPOs11g0103400

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IEAInterProprotein ubiquitination
GO:0032436 IBAUniProtpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209 IBAUniProtprotein polyubiquitination
GO:0042787 IBAUniProtprotein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0010431 IEAPLAZA Integrative Orthologyseed maturationAT2G26130

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAUniProtnucleic acid binding
GO:0004842 IEAInterProubiquitin-protein transferase activity
GO:0046872 IEAUniProtmetal ion binding
GO:0031624 IBAUniProtubiquitin conjugating enzyme binding
GO:0061630 IBAUniProtubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IBAUniProtcytoplasm
GO:0000151 IBAUniProtubiquitin ligase complex

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012337Ribonuclease H-like domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR031127E3 ubiquitin ligase RBR family
IPR002867IBR domain
IPR017907Zinc finger, RING-type, conserved site
IPR001841Zinc finger, RING-type

Mapman id Description
35.2not assigned.not annotated
No SignalP domains detected for this gene.