Gene: LOC_Os10g26410 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os10g26410
Transcript Identifier
LOC_Os10g26410.1
Gene Type
Coding gene
Location
Chr10 : 13722352-13722732 : negative

Family

Gene family
HOM04M000827
(161 genes in 24 species)
specific family
Subfamily
ORTHO04M002176
(76 genes in 19 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
bHLH family protein, putative, expressed

Identifiers

Type Value
idLOC_Os10g26410.MSUv7.0
pacid33102125
tidLOC_Os10g26410.1.MSUv7.0
tidLOC_Os10g26410.1
RAPOs10g0403800

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010086 IEAPLAZA Tree-based Orthologyembryonic root morphogenesisAT1G74500
GO:0009826 IEAPLAZA Tree-based Orthologyunidimensional cell growthAT5G39860
GO:0009640 IEAPLAZA Tree-based OrthologyphotomorphogenesisAT5G39860
GO:0048510 IEAPLAZA Tree-based Orthologyregulation of timing of transition from vegetative to reproductive phaseAT5G39860
GO:0080113 IEAPLAZA Tree-based Orthologyregulation of seed growthLOC_Os03g07510
GO:0009742 IEAPLAZA Tree-based Orthologybrassinosteroid mediated signaling pathwayAT1G74500
GO:0009741 IEAPLAZA Tree-based Orthologyresponse to brassinosteroidAT5G39860
GO:0009416 IEAPLAZA Tree-based Orthologyresponse to light stimulusAT1G26945

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAUniProtprotein dimerization activity
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT5G39860

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Tree-based OrthologynucleusLOC_Os03g07510
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmLOC_Os06g12210
GO:0005773 IEAPLAZA Tree-based OrthologyvacuoleAT5G15160

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
No SignalP domains detected for this gene.