Gene: LOC_Os10g03880 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os10g03880
Transcript Identifier
LOC_Os10g03880.1
Gene Type
Coding gene
Location
Chr10 : 1766346-1767221 : positive

Family

Gene family
HOM04M000414
(276 genes in 28 species)
specific family
Subfamily
ORTHO04M009519
(24 genes in 7 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
CAF1 family ribonuclease containing protein, putative, expressed

Identifiers

Type Value
idLOC_Os10g03880.MSUv7.0
pacid33099216
tidLOC_Os10g03880.1.MSUv7.0
tidLOC_Os10g03880.1
RAPOs10g0128300

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0043928 IBAUniProtexonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
GO:0017148 IBAUniProtnegative regulation of translation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAUniProtnucleic acid binding
GO:0004535 IBAUniProtpoly(A)-specific ribonuclease activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536 RCAGene OntologyplastidGR_REF:7047
GO:0030015 IBAUniProtCCR4-NOT core complex
GO:0000932 IBAUniProtP-body

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012337Ribonuclease H-like domain
IPR006941Ribonuclease CAF1

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.