Gene: LOC_Os09g32930 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os09g32930
Transcript Identifier
LOC_Os09g32930.1
Gene Type
Coding gene
Location
Chr9 : 19620742-19628452 : positive

Family

Gene family
HOM04M003037
(55 genes in 26 species)
specific family

Descriptions

Description
retrotransposon protein, putative, SINE subclass, expressed

Identifiers

Type Value
idLOC_Os09g32930.MSUv7.0
pacid33141626
tidLOC_Os09g32930.1.MSUv7.0
tidLOC_Os09g32930.1
RAPOs09g0506800

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000238 IDAGene OntologyzygoteneGR_REF:110241
GO:0007129 IDAUniProtsynapsisGR_REF:110241
GO:0009556 IDAUniProtmicrosporogenesisGR_REF:110241
GO:0009554 IDAUniProtmegasporogenesisGR_REF:110241
GO:0000237 IDAGene OntologyleptoteneGR_REF:110241
GO:0007130 IEAPLAZA Integrative Orthologysynaptonemal complex assemblyAT4G32200
GO:0051026 IEAPLAZA Integrative Orthologychiasma assemblyAT1G67370

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDAUniProtnucleusGR_REF:110241
GO:0000228 IDA, IGI, UniProtnuclear chromosomeGR_REF:110241 GR_REF:110242
GO:0000775 IEAUniProtchromosome, centromeric region
GO:0005654 IEAPLAZA Integrative OrthologynucleoplasmAT1G67370
GO:0000794 IEAPLAZA Integrative Orthologycondensed nuclear chromosomeAT1G67370
GO:0000785 IEAPLAZA Integrative OrthologychromatinAT1G67370
GO:0005694 IEAPLAZA Integrative OrthologychromosomeAT1G67370

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR003511HORMA domain

Mapman id Description
13.3.6.1.4.Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic initiation.homolog pairing factor (ASY1)
No SignalP domains detected for this gene.