Gene: LOC_Os09g07900 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os09g07900
Transcript Identifier
LOC_Os09g07900.1
Gene Type
Coding gene
Location
Chr9 : 4016486-4034029 : positive

Family

Gene family
HOM04M000701
(185 genes in 29 species)
specific family
Subfamily
ORTHO04M002347
(72 genes in 29 species)
specific family

Descriptions

Description
ubiquitin-protein ligase 1, putative, expressed

Identifiers

Type Value
idLOC_Os09g07900.MSUv7.0
pacid33141722
tidLOC_Os09g07900.1.MSUv7.0
tidLOC_Os09g07900.1
RAPOs09g0252800

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511 IEAPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G70320

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 IEAInterProubiquitin-protein transferase activity
GO:0005488 IEAInterProbinding
GO:0005515 IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G70320
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G55860
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G70320
GO:0000151 IEAPLAZA Integrative Orthologyubiquitin ligase complexAT1G70320
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G55860
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G70320

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000569HECT domain
IPR011989Armadillo-like helical
IPR010309E3 ubiquitin ligase, domain of unknown function DUF908
IPR025527Domain of unknown function DUF4414
IPR010314E3 ubiquitin ligase, domain of unknown function DUF913
IPR015940Ubiquitin-associated domain
IPR003903Ubiquitin interacting motif
IPR016024Armadillo-type fold
IPR009060UBA-like

Mapman id Description
19.2.2.1.5.1.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT)
No SignalP domains detected for this gene.