Gene: LOC_Os08g40180 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os08g40180
Transcript Identifier
LOC_Os08g40180.1
Gene Type
Coding gene
Location
Chr8 : 25426775-25430811 : positive

Family

Gene family
HOM04M001238
(117 genes in 27 species)
specific family
Subfamily
ORTHO04M001616
(90 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed

Identifiers

Type Value
idLOC_Os08g40180.MSUv7.0
pacid33104583
tidLOC_Os08g40180.1.MSUv7.0
tidLOC_Os08g40180.1
RAPOs08g0512700

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008299 IBA, IEA, UniProtisoprenoid biosynthetic process
GO:0055114 IEAInterProoxidation-reduction process
GO:0015936 IEAUniProtcoenzyme A metabolic process
GO:0016126 IBAUniProtsterol biosynthetic process
GO:0016104 IEAPLAZA Integrative Orthologytriterpenoid biosynthetic processAT2G17370
GO:0019287 IEAPLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathwayAT1G76490
GO:0006333 IEAPLAZA Integrative Orthologychromatin assembly or disassemblyAT1G76490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004420 IBA, IEA, UniProthydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0050661 IEAUniProtNADP binding
GO:0050662 IEAInterProcoenzyme binding
GO:0016616 IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042282 IEAPLAZA Integrative Orthologyhydroxymethylglutaryl-CoA reductase activityAT1G76490
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G76490
GO:0030527 IEAPLAZA Integrative Orthologystructural constituent of chromatinAT1G76490
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT1G76490
GO:0003682 IEAPLAZA Integrative Orthologychromatin bindingAT1G76490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAUniProtintegral component of membrane
GO:0005789 IBAUniProtendoplasmic reticulum membrane
GO:0005778 IBAUniProtperoxisomal membrane
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G76490
GO:0043231 IEAPLAZA Integrative Orthologyintracellular membrane-bounded organelleAT2G17370
GO:0005777 IEAPLAZA Integrative OrthologyperoxisomeAT1G76490
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT1G76490
GO:0000785 IEAPLAZA Integrative OrthologychromatinAT1G76490
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT1G76490

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004554Hydroxymethylglutaryl-CoA reductase, eukaryotic/archaeal type
IPR023074Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain
IPR009023Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain
IPR023282Hydroxymethylglutaryl-CoA reductase, N-terminal
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/II
IPR023076Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site
IPR009029Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain

Mapman id Description
9.1.1.3.Secondary metabolism.terpenoids.mevalonate pathway.3-hydroxy-3-methylglutaryl-CoA reductase
No SignalP domains detected for this gene.