Gene: LOC_Os08g24930 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os08g24930
Transcript Identifier
LOC_Os08g24930.1
Gene Type
Coding gene
Location
Chr8 : 15105120-15109102 : positive

Family

Gene family
HOM04M000970
(141 genes in 28 species)
specific family
Subfamily
ORTHO04M016942
(3 genes in 3 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
expressed protein

Identifiers

Type Value
idLOC_Os08g24930.MSUv7.0
pacid33106036
tidLOC_Os08g24930.1.MSUv7.0
tidLOC_Os08g24930.1
RAPOs08g0337100

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010167 IEAPLAZA Tree-based Orthologyresponse to nitrateAT5G48090
GO:2000024 IEAPLAZA Tree-based Orthologyregulation of leaf developmentAT5G48090
GO:0009737 IEAPLAZA Tree-based Orthologyresponse to abscisic acidAT5G48090
GO:0010928 IEAPLAZA Tree-based Orthologyregulation of auxin mediated signaling pathwayAT5G48090
GO:0044030 IEAPLAZA Tree-based Orthologyregulation of DNA methylationAT5G55390
GO:0006355 IEAPLAZA Tree-based Orthologyregulation of transcription, DNA-templatedAT5G55390
GO:0009787 IEAPLAZA Tree-based Orthologyregulation of abscisic acid-activated signaling pathwayAT5G48090
GO:1900363 IEAPLAZA Tree-based Orthologyregulation of mRNA polyadenylationAT5G55390
GO:0007165 IEAPLAZA Tree-based Orthologysignal transductionAT5G55390
GO:0010053 IEAPLAZA Tree-based Orthologyroot epidermal cell differentiationAT5G48090
GO:0030244 IEAPLAZA Tree-based Orthologycellulose biosynthetic processAT5G48090
GO:0031937 IEAPLAZA Tree-based Orthologypositive regulation of chromatin silencingAT5G55390
GO:0009408 IEAPLAZA Tree-based Orthologyresponse to heatAT5G48090
GO:0006979 IEAPLAZA Tree-based Orthologyresponse to oxidative stressAT5G48090
GO:0031538 IEAPLAZA Tree-based Orthologynegative regulation of anthocyanin metabolic processAT5G48090
GO:0009414 IEAPLAZA Tree-based Orthologyresponse to water deprivationAT5G48090
GO:0006623 IEAPLAZA Tree-based Orthologyprotein targeting to vacuoleAT5G48090
GO:0009735 IEAPLAZA Tree-based Orthologyresponse to cytokininAT5G48090
GO:0007034 IEAPLAZA Tree-based Orthologyvacuolar transportAT5G48090
GO:0008284 IEAPLAZA Tree-based Orthologypositive regulation of cell proliferationAT5G48090
GO:1900111 IEAPLAZA Tree-based Orthologypositive regulation of histone H3-K9 dimethylationAT5G55390
GO:0070829 IEAPLAZA Tree-based Orthologyheterochromatin maintenanceAT5G55390
GO:0009651 IEAPLAZA Tree-based Orthologyresponse to salt stressAT5G48090
GO:0035265 IEAPLAZA Tree-based Orthologyorgan growthAT5G48090
GO:0090436 IEAPLAZA Tree-based Orthologyleaf pavement cell developmentAT5G55390
GO:0008283 IEAPLAZA Tree-based Orthologycell proliferationAT5G48090
GO:0010228 IEAPLAZA Tree-based Orthologyvegetative to reproductive phase transition of meristemAT5G55390
GO:0048530 IEAPLAZA Tree-based Orthologyfruit morphogenesisAT5G48090
GO:0006896 IEAPLAZA Tree-based OrthologyGolgi to vacuole transportAT5G48090
GO:0009965 IEAPLAZA Tree-based Orthologyleaf morphogenesisAT5G48090
GO:0061087 IEAPLAZA Tree-based Orthologypositive regulation of histone H3-K27 methylationAT5G55390
GO:0050832 IEAPLAZA Tree-based Orthologydefense response to fungusAT5G55390
GO:0010337 IEAPLAZA Tree-based Orthologyregulation of salicylic acid metabolic processAT5G48090
GO:0071215 IEAPLAZA Tree-based Orthologycellular response to abscisic acid stimulusAT5G48090
GO:0009825 IEAPLAZA Tree-based Orthologymultidimensional cell growthAT5G48090
GO:0006400 IEAPLAZA Tree-based OrthologytRNA modificationAT5G48090
GO:0009911 IEAPLAZA Tree-based Orthologypositive regulation of flower developmentAT5G55390
GO:0080178 IEAPLAZA Tree-based Orthology5-carbamoylmethyl uridine residue modificationAT5G48090

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAPLAZA Tree-based OrthologyDNA bindingAT5G48090
GO:0009940 IEAPLAZA Tree-based Orthologyamino-terminal vacuolar sorting propeptide bindingAT5G48090
GO:0030247 IEAPLAZA Tree-based Orthologypolysaccharide bindingAT5G48090
GO:0003700 IEAPLAZA Tree-based Orthologytranscription factor activity, sequence-specific DNA bindingAT5G55390
GO:0043565 IEAPLAZA Tree-based Orthologysequence-specific DNA bindingAT5G55390

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0033588 IEAPLAZA Tree-based OrthologyElongator holoenzyme complexAT5G48090
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT5G48090
GO:0005783 IEAPLAZA Tree-based Orthologyendoplasmic reticulumAT5G48090
GO:0005802 IEAPLAZA Tree-based Orthologytrans-Golgi networkAT5G48090
GO:0005770 IEAPLAZA Tree-based Orthologylate endosomeAT5G48090
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT5G48090
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneAT5G48090
GO:0005829 IEAPLAZA Tree-based OrthologycytosolAT5G48090
GO:0048046 IEAPLAZA Tree-based OrthologyapoplastAT5G48090
GO:0005794 IEAPLAZA Tree-based OrthologyGolgi apparatusAT5G48090

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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No InterPro domains detected for this gene.
Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.