Gene: LOC_Os08g10510 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os08g10510
Transcript Identifier
LOC_Os08g10510.1
Gene Type
Coding gene
Location
Chr8 : 6170316-6175696 : negative

Family

Gene family
HOM04M002139
(74 genes in 27 species)
specific family
Subfamily
ORTHO04M003120
(59 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
aminotransferase, putative, expressed

Identifiers

Type Value
idLOC_Os08g10510.MSUv7.0
pacid33104369
tidLOC_Os08g10510.1.MSUv7.0
tidLOC_Os08g10510.1
RAPOs08g0205900

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009865 IEAPLAZA Integrative Orthologypollen tube adhesionAT3G22200
GO:0009448 IEAPLAZA Integrative Orthologygamma-aminobutyric acid metabolic processAT3G22200
GO:0005985 IEAPLAZA Integrative Orthologysucrose metabolic processAT3G22200
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT3G22200
GO:0009860 IEAPLAZA Integrative Orthologypollen tube growthAT3G22200
GO:0010154 IEAPLAZA Integrative Orthologyfruit developmentAT3G22200
GO:0010033 IEAPLAZA Integrative Orthologyresponse to organic substanceAT3G22200
GO:0019484 IEAPLAZA Integrative Orthologybeta-alanine catabolic processAT3G22200
GO:0048367 IEAPLAZA Integrative Orthologyshoot system developmentAT3G22200
GO:0006536 IEAPLAZA Integrative Orthologyglutamate metabolic processAT3G22200
GO:0006979 IEAPLAZA Integrative Orthologyresponse to oxidative stressAT3G22200
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT3G22200
GO:0006105 IEAPLAZA Integrative Orthologysuccinate metabolic processAT3G22200
GO:0006540 IEAPLAZA Integrative Orthologyglutamate decarboxylation to succinateAT3G22200
GO:0006541 IEAPLAZA Integrative Orthologyglutamine metabolic processAT3G22200
GO:0009450 IEAPLAZA Integrative Orthologygamma-aminobutyric acid catabolic processAT3G22200
GO:0010183 IEAPLAZA Integrative Orthologypollen tube guidanceAT3G22200
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT3G22200
GO:0006020 IEAPLAZA Integrative Orthologyinositol metabolic processAT3G22200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008483 IEAUniProttransaminase activity
GO:0030170 IEAUniProtpyridoxal phosphate binding
GO:0003824 IEAInterProcatalytic activity
GO:0034387 IEAPLAZA Integrative Orthology4-aminobutyrate:pyruvate transaminase activityAT3G22200
GO:0008270 IEAPLAZA Integrative Orthologyzinc ion bindingAT3G22200
GO:0050897 IEAPLAZA Integrative Orthologycobalt ion bindingAT3G22200
GO:0003867 IEAPLAZA Integrative Orthology4-aminobutyrate transaminase activityAT3G22200

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 IEA, RCA, UniProtmitochondrionGR_REF:7047
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT3G22200
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT3G22200

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005814Aminotransferase class-III
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2
IPR015424Pyridoxal phosphate-dependent transferase

Mapman id Description
4.2.2.1.Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).gamma-aminobutyric acid pyruvate transaminase
No SignalP domains detected for this gene.