Gene: LOC_Os07g38970 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os07g38970
Transcript Identifier
LOC_Os07g38970.1
Gene Type
Coding gene
Location
Chr7 : 23361279-23365588 : positive

Family

Gene family
HOM04M003748
(46 genes in 29 species)
specific family

Descriptions

Description
succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed

Identifiers

Type Value
idLOC_Os07g38970.MSUv7.0
pacid33117505
tidLOC_Os07g38970.1.MSUv7.0
tidLOC_Os07g38970.1
RAPOs07g0577700

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152 IEAInterPrometabolic process
GO:0006099 IEAUniProttricarboxylic acid cycle
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT5G08300

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0048037 IEAUniProtcofactor binding
GO:0000166 IEAUniProtnucleotide binding
GO:0004775 IEAUniProtsuccinate-CoA ligase (ADP-forming) activity
GO:0004776 IBAUniProtsuccinate-CoA ligase (GDP-forming) activity
GO:0046872 IEAPLAZA Integrative Orthologymetal ion bindingAT5G08300
GO:0005507 IEAPLAZA Integrative Orthologycopper ion bindingAT5G08300

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 RCAGene OntologymitochondrionGR_REF:7047
GO:0005759 IBAUniProtmitochondrial matrix
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT5G08300

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016102Succinyl-CoA synthetase-like
IPR005810Succinyl-CoA ligase, alpha subunit
IPR005811ATP-citrate lyase/succinyl-CoA ligase
IPR003781CoA-binding
IPR017440ATP-citrate lyase/succinyl-CoA ligase, active site
IPR033847ATP-citrate lyase/succinyl-CoA ligase, conserved site
IPR016040NAD(P)-binding domain

Mapman id Description
2.3.5.1.Cellular respiration.tricarboxylic acid cycle.succinyl-CoA ligase heterodimer.subunit alpha
No SignalP domains detected for this gene.