Gene: LOC_Os07g13170 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os07g13170
Transcript Identifier
LOC_Os07g13170.2
Gene Type
Coding gene
Location
Chr7 : 7545753-7549431 : positive

Family

Gene family
HOM04M000119
(726 genes in 29 species)
specific family
Subfamily
ORTHO04M000063
(682 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
AP2 domain containing protein, expressed

Identifiers

Type Value
idLOC_Os07g13170.MSUv7.0
pacid33117655
tidLOC_Os07g13170.2.MSUv7.0
tidLOC_Os07g13170.2
RAPOs07g0235800

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IC, IEAGene Ontologyregulation of transcription, DNA-templatedGR_REF:11089
GO:0007275 IEAUniProtmulticellular organism development
GO:0048506 ICGene Ontologyregulation of timing of meristematic phase transitionGR_REF:11089
GO:0010092 ICGene Ontologyspecification of animal organ identityGR_REF:11089
GO:0010022 ICGene Ontologymeristem determinacyGR_REF:11089
GO:0010077 ICGene Ontologymaintenance of inflorescence meristem identityGR_REF:11089
GO:1905392 IEAPLAZA Integrative Orthologyplant organ morphogenesisAT2G28550
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT3G54990
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT2G28550

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEA, IC, UniProttranscription factor activity, sequence-specific DNA bindingGR_REF:11089
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G60120

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ICGene OntologynucleusGR_REF:11089

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001471AP2/ERF domain
IPR031112AP2-like ethylene-responsive transcription factor
IPR016177DNA-binding domain

Mapman id Description
15.5.7.3.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)
No SignalP domains detected for this gene.