Gene: LOC_Os07g08170 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os07g08170
Transcript Identifier
LOC_Os07g08170.1
Gene Type
Coding gene
Location
Chr7 : 4151289-4155867 : negative

Family

Gene family
HOM04M001427
(103 genes in 29 species)
specific family
Subfamily
ORTHO04M004834
(43 genes in 29 species)
specific family

Descriptions

Description
ruvB-like, putative, expressed

Identifiers

Type Value
idLOC_Os07g08170.MSUv7.0
pacid33114793
tidLOC_Os07g08170.1.MSUv7.0
tidLOC_Os07g08170.1
RAPOs07g0178900

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048507 IEAPLAZA Integrative Orthologymeristem developmentAT5G22330
GO:2000072 IEAPLAZA Integrative Orthologyregulation of defense response to fungus, incompatible interactionAT5G22330

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043141 IEAInterProATP-dependent 5'-3' DNA helicase activity
GO:0003678 IEAInterProDNA helicase activity
GO:0005524 IEAInterProATP binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G22330

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT5G22330
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G22330
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G22330
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G22330

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027238RuvB-like
IPR010339TIP49, C-terminal
IPR003593AAA+ ATPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
12.4.7.Chromatin organisation.chromatin remodeling complexes.SWR1/NuA4-shared helicase (RVB)
No SignalP domains detected for this gene.