Gene: LOC_Os06g48940 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os06g48940
Transcript Identifier
LOC_Os06g48940.1
Gene Type
Coding gene
Location
Chr6 : 29626333-29633988 : positive

Family

Gene family
HOM04M002464
(66 genes in 28 species)
specific family
Subfamily
ORTHO04M003009
(60 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
GHMP kinases ATP-binding protein, putative, expressed

Identifiers

Type Value
idLOC_Os06g48940.MSUv7.0
pacid33148383
tidLOC_Os06g48940.1.MSUv7.0
tidLOC_Os06g48940.1
RAPOs06g0702500

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0019566 IEAPLAZA Integrative Orthologyarabinose metabolic processAT4G16130
GO:0006396 IEAPLAZA Integrative OrthologyRNA processingAT4G16130

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524 IEAInterProATP binding
GO:0003824 IEAPLAZA Integrative Orthologycatalytic activityAT4G16130
GO:0009702 IEAPLAZA Integrative OrthologyL-arabinokinase activityAT4G16130
GO:0005534 IEAPLAZA Homology (enrichment)galactose binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT4G16130
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G16130

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR013750GHMP kinase, C-terminal domain
IPR006204GHMP kinase N-terminal domain
IPR012369Galactokinase, glycosyltransferase
IPR020568Ribosomal protein S5 domain 2-type fold

Mapman id Description
3.13.7.2.1.Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose biosynthesis.salvage biosynthesis.L-arabinose kinase
No SignalP domains detected for this gene.