Gene: LOC_Os06g16370 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os06g16370
Transcript Identifier
LOC_Os06g16370.1
Gene Type
Coding gene
Location
Chr6 : 9336535-9338359 : positive

Family

Gene family
HOM04M000685
(187 genes in 29 species)
specific family

Descriptions

Description
CCT/B-box zinc finger protein, putative, expressed

Identifiers

Type Value
idLOC_Os06g16370.MSUv7.0
pacid33147060
tidLOC_Os06g16370.1.MSUv7.0
tidLOC_Os06g16370.1
RAPOs06g0275000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010229 IGIGene Ontologyinflorescence developmentGR_REF:51271
GO:0048571 IEP, IGI, UniProtlong-day photoperiodismGR_REF:51271 GR_REF:51272
GO:0048572 IEP, IGI, UniProtshort-day photoperiodismGR_REF:51271 GR_REF:51272
GO:0009648 ICGene OntologyphotoperiodismGR_REF:11089
GO:0008150 ICGene Ontologybiological_processGR_REF:11089
GO:0030154 IEAUniProtcell differentiation
GO:0009908 IEAUniProtflower development
GO:0048579 IMPUniProtnegative regulation of long-day photoperiodism, flowering
GO:0045892 IMPUniProtnegative regulation of transcription, DNA-templated
GO:0048576 IMPUniProtpositive regulation of short-day photoperiodism, flowering
GO:0009909 IMPUniProtregulation of flower development
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT3G02380
GO:0010018 IEAPLAZA Integrative Orthologyfar-red light signaling pathwayAT5G15840
GO:0007623 IEAPLAZA Integrative Orthologycircadian rhythmAT5G15850
GO:0010218 IEAPLAZA Integrative Orthologyresponse to far red lightAT5G15840

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEA, ISSRCA, UniProtzinc ion bindingGR_REF:51271 GR_REF:8030
GO:0005515 IEAInterProprotein binding
GO:0003677 IEA, ISSRCA, UniProtDNA bindingGR_REF:51271 GR_REF:8030
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA bindingGR_REF:51271
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT5G15850

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAInterProintracellular
GO:0005634 IBA, ISS, UniProtnucleusGR_REF:51271

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000315B-box-type zinc finger
IPR010402CCT domain

Mapman id Description
15.5.1.2.RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-CO)
No SignalP domains detected for this gene.