Gene: LOC_Os06g10340 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os06g10340
Transcript Identifier
LOC_Os06g10340.1
Gene Type
Coding gene
Location
Chr6 : 5308992-5310602 : positive

Family

Gene family
HOM04M005417
(36 genes in 26 species)
specific family

Descriptions

Description
autophagy-related protein 12, putative, expressed

Identifiers

Type Value
idLOC_Os06g10340.MSUv7.0
pacid33149146
tidLOC_Os06g10340.1.MSUv7.0
tidLOC_Os06g10340.1
RAPOs06g0205000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000045 IBA, IEA, UniProtautophagosome assembly
GO:0006501 IBAUniProtC-terminal protein lipidation
GO:0000422 IBAUniProtmitophagy
GO:0044804 IBAUniProtnucleophagy
GO:0015031 IEAUniProtprotein transport
GO:0006914 IEAPLAZA Integrative OrthologyautophagyAT3G13970

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0019776 IBAUniProtAtg8 ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0034274 IBAUniProtAtg12-Atg5-Atg16 complex
GO:0034045 IBAUniProtpre-autophagosomal structure membrane

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR007242Ubiquitin-like protein Atg12
IPR029071Ubiquitin-related domain

Mapman id Description
19.3.3.5.1.Protein homeostasis.autophagy.ATG8/ATG12 conjugation system.ATG12-ATG5 ATG8-PE-ligase E3 heterodimer.ubiquitin-fold component ATG12
No SignalP domains detected for this gene.