Gene: LOC_Os06g08790 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os06g08790
Transcript Identifier
LOC_Os06g08790.1
Gene Type
Coding gene
Location
Chr6 : 4393470-4400694 : positive

Family

Gene family
HOM04M004063
(44 genes in 29 species)
specific family

Descriptions

Description
ORC1 - Putative origin recognition complex subunit 1, expressed

Identifiers

Type Value
idLOC_Os06g08790.MSUv7.0
pacid33145868
tidLOC_Os06g08790.1.MSUv7.0
tidLOC_Os06g08790.1
RAPOs06g0187000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEA, RCA, UniProtregulation of transcription, DNA-templatedGR_REF:8030
GO:0006260 IEAUniProtDNA replication
GO:0009744 IDAUniProtresponse to sucrose
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0009567 IEAPLAZA Integrative Orthologydouble fertilization forming a zygote and endospermAT4G12620

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524 IEA, RCA, UniProtATP bindingGR_REF:8030
GO:0003682 IEAUniProtchromatin binding
GO:0000166 RCAGene Ontologynucleotide bindingGR_REF:8030
GO:0003677 IEA, RCA, UniProtDNA bindingGR_REF:8030
GO:0046872 IEAUniProtmetal ion binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G14700
GO:0010385 IEAPLAZA Integrative Orthologydouble-stranded methylated DNA bindingAT4G14700

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536 RCAGene OntologyplastidGR_REF:7047
GO:0005634 IDAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR003959ATPase, AAA-type, core
IPR001025Bromo adjacent homology (BAH) domain
IPR019787Zinc finger, PHD-finger
IPR019786Zinc finger, PHD-type, conserved site
IPR003593AAA+ ATPase domain
IPR001965Zinc finger, PHD-type
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
13.2.1.1.1.Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC1
No SignalP domains detected for this gene.