Gene: LOC_Os05g38640 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os05g38640
Transcript Identifier
LOC_Os05g38640.1
Gene Type
Coding gene
Location
Chr5 : 22657373-22657940 : negative

Family

Gene family
HOM04M000147
(594 genes in 29 species)
specific family
Subfamily
ORTHO04M000156
(387 genes in 29 species)
specific family

Descriptions

Description
Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed

Identifiers

Type Value
idLOC_Os05g38640.MSUv7.0
pacid33157689
tidLOC_Os05g38640.1.MSUv7.0
tidLOC_Os05g38640.1
RAPOs05g0461400

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006342 IBAUniProtchromatin silencing

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IBA, IEA, UniProtDNA binding
GO:0046982 IEAUniProtprotein heterodimerization activity
GO:0003682 IEAUniProtchromatin binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000786 IEAUniProtnucleosome
GO:0005634 IEAInterPronucleus
GO:0000775 IEAUniProtchromosome, centromeric region
GO:0000792 IEAUniProtheterochromatin
GO:0000790 IBAUniProtnuclear chromatin

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR032454Histone H2A, C-terminal domain
IPR007125Histone H2A/H2B/H3
IPR002119Histone H2A
IPR032458Histone H2A conserved site
IPR009072Histone-fold

Mapman id Description
12.1.2.Chromatin organisation.histones.histone (H2A)
No SignalP domains detected for this gene.