Gene: LOC_Os05g28350 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os05g28350
Transcript Identifier
LOC_Os05g28350.1
Gene Type
Coding gene
Location
Chr5 : 16601004-16601813 : negative

Family

Gene family
HOM04M000008
(3579 genes in 29 species)
specific family
Subfamily
ORTHO04M000003
(3095 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
AP2 domain containing protein, expressed

Identifiers

Type Value
idLOC_Os05g28350.MSUv7.0
pacid33157462
tidLOC_Os05g28350.1.MSUv7.0
tidLOC_Os05g28350.1
RAPOs05g0351200

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009738 IEAUniProtabscisic acid-activated signaling pathway
GO:0048316 IEAUniProtseed development
GO:0048527 IEAUniProtlateral root development
GO:0031930 IEAUniProtmitochondria-nucleus signaling pathway
GO:0045893 IBAUniProtpositive regulation of transcription, DNA-templated
GO:0032880 IEAUniProtregulation of protein localization
GO:0010119 IEAUniProtregulation of stomatal movement
GO:0010896 IEAUniProtregulation of triglyceride catabolic process
GO:0009749 IEAUniProtresponse to glucose
GO:0006970 IEAUniProtresponse to osmotic stress
GO:0009744 IEAUniProtresponse to sucrose
GO:0010353 IEAUniProtresponse to trehalose
GO:0009414 IEAUniProtresponse to water deprivation
GO:0010449 IEAUniProtroot meristem growth
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0010182 IEAPLAZA Integrative Orthologysugar mediated signaling pathwayAT2G40220

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IBA, IEA, UniProttranscription factor activity, sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0044212 IBAUniProttranscription regulatory region DNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G40220

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001471AP2/ERF domain
IPR033266Ethylene-responsive transcription factor ABI4
IPR016177DNA-binding domain

Mapman id Description
15.5.7.2.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB)
No SignalP domains detected for this gene.