Gene: LOC_Os05g03550 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os05g03550
Transcript Identifier
LOC_Os05g03550.1
Gene Type
Coding gene
Location
Chr5 : 1501462-1507839 : negative

Family

Gene family
HOM04M003109
(54 genes in 29 species)
specific family

Descriptions

Description
MYB family transcription factor, putative, expressed

Identifiers

Type Value
idLOC_Os05g03550.MSUv7.0
pacid33157256
tidLOC_Os05g03550.1.MSUv7.0
tidLOC_Os05g03550.1
RAPOs05g0126400

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000122 IEAPLAZA Integrative Orthologynegative regulation of transcription from RNA polymerase II promoterAT3G52250
GO:2000617 IEAPLAZA Integrative Orthologypositive regulation of histone H3-K9 acetylationAT3G52250
GO:0010582 IEAPLAZA Integrative Orthologyfloral meristem determinacyAT3G52250
GO:1900055 IEAPLAZA Integrative Orthologyregulation of leaf senescenceAT3G52250
GO:1990619 IEAPLAZA Integrative Orthologyhistone H3-K9 deacetylationAT3G52250

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G52250

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 RCAGene OntologymitochondrionGR_REF:7047

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017884SANT domain
IPR009057Homeobox domain-like

Mapman id Description
12.3.2.1.4.2.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.component PWR
No SignalP domains detected for this gene.