Gene: LOC_Os04g59510 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os04g59510
Transcript Identifier
LOC_Os04g59510.1
Gene Type
Coding gene
Location
Chr4 : 35385871-35390394 : negative

Family

Gene family
HOM04M000437
(264 genes in 29 species)
specific family

Descriptions

Description
PHD finger family protein, putative, expressed

Identifiers

Type Value
idLOC_Os04g59510.MSUv7.0
pacid33110015
tidLOC_Os04g59510.1.MSUv7.0
tidLOC_Os04g59510.1
RAPOs04g0691700

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT5G58610
GO:0043971 IEAPLAZA Integrative Orthologyhistone H3-K18 acetylationAT3G14980
GO:0043972 IEAPLAZA Integrative Orthologyhistone H3-K23 acetylationAT3G14980
GO:0044154 IEAPLAZA Integrative Orthologyhistone H3-K14 acetylationAT3G14980
GO:0080188 IEAPLAZA Integrative OrthologyRNA-directed DNA methylationAT3G14980
GO:0044030 IEAPLAZA Integrative Orthologyregulation of DNA methylationAT3G14980

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008080 IEAInterProN-acetyltransferase activity
GO:0042393 IEAPLAZA Integrative Orthologyhistone bindingAT3G14980
GO:0010385 IEAPLAZA Integrative Orthologydouble-stranded methylated DNA bindingAT3G14980
GO:0004402 IEAPLAZA Integrative Orthologyhistone acetyltransferase activityAT3G14980

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G14980
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G14980

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019787Zinc finger, PHD-finger
IPR000182GNAT domain
IPR001965Zinc finger, PHD-type
IPR011011Zinc finger, FYVE/PHD-type
IPR016181Acyl-CoA N-acyltransferase

Mapman id Description
15.5.30.RNA biosynthesis.transcriptional regulation.transcription factor (PHD)
No SignalP domains detected for this gene.