Gene: LOC_Os04g58920 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os04g58920
Transcript Identifier
LOC_Os04g58920.1
Gene Type
Coding gene
Location
Chr4 : 35054777-35056018 : negative

Family

Gene family
HOM04M000074
(1104 genes in 29 species)
specific family
Subfamily
ORTHO04M000187
(344 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
U-box domain-containing protein, putative, expressed

Identifiers

Type Value
idLOC_Os04g58920.MSUv7.0
pacid33108021
tidLOC_Os04g58920.1.MSUv7.0
tidLOC_Os04g58920.1
RAPOs04g0686000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IEAInterProprotein ubiquitination
GO:0051865 IEAPLAZA Integrative Orthologyprotein autoubiquitinationAT3G11840
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT2G35930
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT3G11840
GO:0006952 IEAPLAZA Integrative Orthologydefense responseAT3G11840
GO:0002679 IEAPLAZA Integrative Orthologyrespiratory burst involved in defense responseAT3G11840

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 IEAInterProubiquitin-protein transferase activity
GO:0005488 IEAInterProbinding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G35930

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011989Armadillo-like helical
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR003613U box domain
IPR016024Armadillo-type fold

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.