Gene: LOC_Os04g54900 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os04g54900
Transcript Identifier
LOC_Os04g54900.1
Gene Type
Coding gene
Location
Chr4 : 32657761-32658175 : negative

Family

Gene family
HOM04M000827
(161 genes in 24 species)
specific family
Subfamily
ORTHO04M011137
(13 genes in 9 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
bHLH family protein, putative, expressed

Identifiers

Type Value
idLOC_Os04g54900.MSUv7.0
pacid33111432
tidLOC_Os04g54900.1.MSUv7.0
tidLOC_Os04g54900.1
RAPOs04g0641700

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0040008 IEAUniProtregulation of growth
GO:0006355 IEAUniProtregulation of transcription, DNA-templated
GO:0009741 IEPUniProtresponse to brassinosteroid
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0009826 IMPUniProtunidimensional cell growth
GO:0010086 IEAPLAZA Tree-based Orthologyembryonic root morphogenesisAT1G74500
GO:0009640 IEAPLAZA Tree-based OrthologyphotomorphogenesisAT5G39860
GO:0048510 IEAPLAZA Tree-based Orthologyregulation of timing of transition from vegetative to reproductive phaseAT5G39860
GO:0080113 IEAPLAZA Tree-based Orthologyregulation of seed growthLOC_Os03g07510
GO:0009742 IEAPLAZA Tree-based Orthologybrassinosteroid mediated signaling pathwayAT1G74500
GO:0009416 IEAPLAZA Tree-based Orthologyresponse to light stimulusAT1G26945

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAUniProtprotein dimerization activity
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT5G39860

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536 RCAGene OntologyplastidGR_REF:7047
GO:0005634 IEAPLAZA Tree-based OrthologynucleusLOC_Os03g07510
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmLOC_Os06g12210
GO:0005773 IEAPLAZA Tree-based OrthologyvacuoleAT5G15160

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
No SignalP domains detected for this gene.