Gene: LOC_Os04g54500 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os04g54500
Transcript Identifier
LOC_Os04g54500.1
Gene Type
Coding gene
Location
Chr4 : 32419104-32423492 : positive

Family

Gene family
HOM04M002235
(71 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
POLGAMMA2, putative, expressed

Identifiers

Type Value
idLOC_Os04g54500.MSUv7.0
pacid33107820
tidLOC_Os04g54500.1.MSUv7.0
tidLOC_Os04g54500.1
RAPOs04g0637400

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006260 IEAInterProDNA replication
GO:0006139 IEAInterPronucleobase-containing compound metabolic process
GO:0006261 IEAInterProDNA-dependent DNA replication
GO:0006264 IEAPLAZA Integrative Orthologymitochondrial DNA replicationAT1G50840
GO:0033259 IEAPLAZA Integrative Orthologyplastid DNA replicationAT1G50840
GO:0006302 IEAPLAZA Integrative Orthologydouble-strand break repairAT3G20540

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0003677 IEAInterProDNA binding
GO:0003887 IEAInterProDNA-directed DNA polymerase activity
GO:0008408 IEAInterPro3'-5' exonuclease activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009295 IEAPLAZA Integrative OrthologynucleoidAT3G20540
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G50840
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G50840
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT1G50840

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012337Ribonuclease H-like domain
IPR001098DNA-directed DNA polymerase, family A, palm domain
IPR0025623'-5' exonuclease domain
IPR002298DNA polymerase A

Mapman id Description
13.5.1.Cell cycle organisation.organellar DNA replication.DNA polymerase (POP)
No SignalP domains detected for this gene.