Gene: LOC_Os04g54474 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os04g54474
Transcript Identifier
LOC_Os04g54474.1
Gene Type
Coding gene
Location
Chr4 : 32406512-32411558 : positive

Family

Gene family
HOM04M000258
(384 genes in 27 species)
specific family
Subfamily
ORTHO04M000364
(242 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
transcription factor, putative, expressed

Identifiers

Type Value
idLOC_Os04g54474.MSUv7.0
pacid33108002
tidLOC_Os04g54474.1.MSUv7.0
tidLOC_Os04g54474.1
RAPOs04g0637000

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0006952 IEAUniProtdefense response
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT5G10030
GO:0009862 IEAPLAZA Integrative Orthologysystemic acquired resistance, salicylic acid mediated signaling pathwayAT1G22070
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT5G65210

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEAUniProttranscription factor activity, sequence-specific DNA binding
GO:0043565 IEAUniProtsequence-specific DNA binding
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT5G65210
GO:0005516 IEAPLAZA Integrative Orthologycalmodulin bindingAT1G22070
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G65210
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT5G65210

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004827Basic-leucine zipper domain
IPR025422Transcription factor TGA like domain

Mapman id Description
15.5.4.1.RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.transcription factor (bZIP)
15.5.4.7.1.RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.TGA transcription factor activity.transcription factor (TGA)
No SignalP domains detected for this gene.