Gene: LOC_Os04g51350 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os04g51350
Transcript Identifier
LOC_Os04g51350.1
Gene Type
Coding gene
Location
Chr4 : 30410228-30412642 : positive

Family

Gene family
HOM04M000001
(8521 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
pentatricopeptide, putative, expressed

Identifiers

Type Value
idLOC_Os04g51350.MSUv7.0
pacid33112428
tidLOC_Os04g51350.1.MSUv7.0
tidLOC_Os04g51350.1
RAPOs04g0602600

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:1900865 IEAPLAZA Integrative Orthologychloroplast RNA modificationAT3G22150
GO:0080156 IEAPLAZA Integrative Orthologymitochondrial mRNA modificationAT3G22150

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0003867 IEAPLAZA Integrative Orthology4-aminobutyrate transaminase activityAT3G22150

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 RCAGene OntologymitochondrionGR_REF:7047
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT3G22150
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G22150

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011990Tetratricopeptide-like helical domain
IPR002885Pentatricopeptide repeat

Mapman id Description
16.12.5.5.5.RNA processing.organelle machinery.RNA editing.plastidial RNA editing factor activities (PPR-type).RNA editing factor (AEF1)
No SignalP domains detected for this gene.