Gene: LOC_Os04g50770 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os04g50770
Transcript Identifier
LOC_Os04g50770.1
Gene Type
Coding gene
Location
Chr4 : 30029233-30030558 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
MYB family transcription factor, putative, expressed

Identifiers

Type Value
idLOC_Os04g50770.MSUv7.0
pacid33111056
tidLOC_Os04g50770.1.MSUv7.0
tidLOC_Os04g50770.1
RAPOs04g0594100

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009809 IEAPLAZA Integrative Orthologylignin biosynthetic processAT1G79180
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT1G79180
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT1G79180
GO:0009411 IEAPLAZA Integrative Orthologyresponse to UVAT1G79180
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT1G79180
GO:2000652 IEAPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT1G79180

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT1G79180

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G79180

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.