Gene: LOC_Os04g39470 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os04g39470
Transcript Identifier
LOC_Os04g39470.1
Gene Type
Coding gene
Location
Chr4 : 23510646-23511954 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

Description
MYB family transcription factor, putative, expressed

Identifiers

Type Value
idLOC_Os04g39470.MSUv7.0
pacid33113161
tidLOC_Os04g39470.1.MSUv7.0
tidLOC_Os04g39470.1
RAPOs04g0470600

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048658 IMPUniProtanther wall tapetum development
GO:0030154 IBAUniProtcell differentiation
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0010090 IEAPLAZA Integrative Orthologytrichome morphogenesisAT5G56110
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT5G56110
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G56110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0044212 IBAUniProttranscription regulatory region DNA binding
GO:0003682 IEAPLAZA Integrative Orthologychromatin bindingAT5G56110
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G56110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 RCAGene OntologymembraneGR_REF:8210
GO:0005634 IBAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
21.8.1.1.Cell wall organisation.sporopollenin.biosynthesis.transcriptional key regulator (MS188)
No SignalP domains detected for this gene.