Gene: LOC_Os04g31040 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os04g31040
Transcript Identifier
LOC_Os04g31040.1
Gene Type
Coding gene
Location
Chr4 : 18551602-18553590 : negative

Family

Gene family
HOM04M005136
(38 genes in 28 species)
specific family

Descriptions

Description
violaxanthin de-epoxidase, putative, expressed

Identifiers

Type Value
idLOC_Os04g31040.MSUv7.0
pacid33113043
tidLOC_Os04g31040.1.MSUv7.0
tidLOC_Os04g31040.1
RAPOs04g0379700

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0006631 IEAPLAZA Integrative Orthologyfatty acid metabolic processAT1G08550
GO:0016122 IEAPLAZA Integrative Orthologyxanthophyll metabolic processAT1G08550
GO:0010028 IEAPLAZA Integrative Orthologyxanthophyll cycleAT1G08550
GO:0009408 IEAPLAZA Integrative Orthologyresponse to heatAT1G08550
GO:0015994 IEAPLAZA Integrative Orthologychlorophyll metabolic processAT1G08550

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046422 IEAInterProviolaxanthin de-epoxidase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G08550
GO:0019904 IEAPLAZA Integrative Orthologyprotein domain specific bindingAT1G08550

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAInterProchloroplast
GO:0009543 IEAPLAZA Integrative Orthologychloroplast thylakoid lumenAT1G08550
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidAT1G08550
GO:0030095 IEAPLAZA Integrative Orthologychloroplast photosystem IIAT1G08550
GO:0031977 IEAPLAZA Integrative Orthologythylakoid lumenAT1G08550

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012674Calycin
IPR010788VDE lipocalin domain

Mapman id Description
1.1.1.5.1.3.1Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).xanthophyll cycle.violaxanthin de-epoxidase
9.1.6.2.2.Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.violaxanthin de-epoxidase (VDE)
No SignalP domains detected for this gene.