Gene: LOC_Os03g54160 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os03g54160
Transcript Identifier
LOC_Os03g54160.1
Gene Type
Coding gene
Location
Chr3 : 31032083-31041261 : negative

Family

Gene family
HOM04M000038
(1510 genes in 29 species)
specific family
Subfamily
ORTHO04M000013
(1412 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
OsMADS14 - MADS-box family gene with MIKCc type-box, expressed

Identifiers

Type Value
idLOC_Os03g54160.MSUv7.0
pacid33129942
tidLOC_Os03g54160.1.MSUv7.0
tidLOC_Os03g54160.1
RAPOs03g0752800

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045944 IEAUniProtpositive regulation of transcription from RNA polymerase II promoter
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0030154 IEAUniProtcell differentiation
GO:0009908 IEAUniProtflower development
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0010048 IEAPLAZA Integrative Orthologyvernalization responseAT5G65060
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT1G69120
GO:0009911 IEAPLAZA Integrative Orthologypositive regulation of flower developmentAT5G60910
GO:0009910 IEAPLAZA Integrative Orthologynegative regulation of flower developmentAT5G65070
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT3G30260
GO:0009933 IEAPLAZA Integrative Orthologymeristem structural organizationAT1G69120
GO:0010076 IEAPLAZA Integrative Orthologymaintenance of floral meristem identityAT1G69120
GO:0010582 IEAPLAZA Integrative Orthologyfloral meristem determinacyAT1G69120
GO:0010154 IEAPLAZA Integrative Orthologyfruit developmentAT5G60910
GO:0010077 IEAPLAZA Integrative Orthologymaintenance of inflorescence meristem identityAT5G60910

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000977 IEAUniProtRNA polymerase II regulatory region sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding
GO:0046983 IEAUniProtprotein dimerization activity
GO:0003700 IEAUniProttranscription factor activity, sequence-specific DNA binding
GO:0046982 IEAPLAZA Integrative Orthologyprotein heterodimerization activityAT1G69120
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G69120

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAUniProtnucleus
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G65070

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033896MADS MEF2-like
IPR002100Transcription factor, MADS-box
IPR002487Transcription factor, K-box

Mapman id Description
15.5.14.RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)
No SignalP domains detected for this gene.