Gene: LOC_Os03g51740 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os03g51740
Transcript Identifier
LOC_Os03g51740.1
Gene Type
Coding gene
Location
Chr3 : 29661007-29662761 : negative

Family

Gene family
HOM04M000340
(321 genes in 29 species)
specific family
Subfamily
ORTHO04M000540
(182 genes in 29 species)
specific family

Descriptions

Description
aminotransferase, classes I and II, domain containing protein, expressed

Identifiers

Type Value
idLOC_Os03g51740.MSUv7.0
pacid33128777
tidLOC_Os03g51740.1.MSUv7.0
tidLOC_Os03g51740.1
RAPOs03g0727600

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058 IEAInterProbiosynthetic process
GO:0009693 IEAUniProtethylene biosynthetic process
GO:0009835 IEAUniProtfruit ripening
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT2G22810
GO:0071281 IEAPLAZA Integrative Orthologycellular response to iron ionAT3G49700
GO:0001944 IEAPLAZA Integrative Orthologyvasculature developmentAT5G65800
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT5G65800
GO:0006417 IEAPLAZA Integrative Orthologyregulation of translationAT3G49700
GO:0042218 IEAPLAZA Integrative Orthology1-aminocyclopropane-1-carboxylate biosynthetic processAT5G65800
GO:0051301 IEAPLAZA Integrative Orthologycell divisionAT5G65800

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0030170 IEAUniProtpyridoxal phosphate binding
GO:0016847 IEAUniProt1-aminocyclopropane-1-carboxylate synthase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G65800
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT2G22810

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2
IPR004839Aminotransferase, class I/classII
IPR004838Aminotransferases, class-I, pyridoxal-phosphate-binding site
IPR015424Pyridoxal phosphate-dependent transferase

Mapman id Description
11.5.1.1.Phytohormone action.ethylene.biosynthesis.1-aminocyclopropane-1-carboxylate (ACC) synthase
No SignalP domains detected for this gene.