PLAZA 4.0 Monocots gene overview : LOC

Gene: LOC_Os03g50860 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: LOC_Os03g50860
Transcript Identifier: LOC_Os03g50860.1
Gene Type: Coding gene
Location: Chr3 : 29052532-29058005 : positive

Family

Gene family: HOM04M000291
(359 genes in 29 species)
specific family
Subfamily: ORTHO04M000614
(169 genes in 29 species)
specific family

Descriptions

Description: histidine kinase, putative, expressed

Identifiers

Type	Value
id	LOC_Os03g50860.MSUv7.0
pacid	33130423
tid	LOC_Os03g50860.1.MSUv7.0
tid	LOC_Os03g50860.1
RAP	Os03g0717700

Toolbox

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0007165	IEA	InterPro	signal transduction
GO:0000160	IEA	InterPro	phosphorelay signal transduction system
GO:0016310	IEA	InterPro	phosphorylation
GO:0009736	IEA	UniProt	cytokinin-activated signaling pathway
GO:0006468	IDA	UniProt	protein phosphorylation
GO:0070417	IEA	PLAZA Integrative Orthology	cellular response to cold	AT5G35750
GO:0034757	IEA	PLAZA Integrative Orthology	negative regulation of iron ion transport	AT5G35750
GO:0071329	IEA	PLAZA Integrative Orthology	cellular response to sucrose stimulus	AT2G01830
GO:0010029	IEA	PLAZA Integrative Orthology	regulation of seed germination	AT2G01830
GO:0033500	IEA	PLAZA Integrative Orthology	carbohydrate homeostasis	AT2G01830
GO:0009737	IEA	PLAZA Integrative Orthology	response to abscisic acid	AT5G35750
GO:0042742	IEA	PLAZA Integrative Orthology	defense response to bacterium	AT2G01830
GO:0006970	IEA	PLAZA Integrative Orthology	response to osmotic stress	AT5G35750
GO:0010271	IEA	PLAZA Integrative Orthology	regulation of chlorophyll catabolic process	AT5G35750
GO:0010150	IEA	PLAZA Integrative Orthology	leaf senescence	AT2G01830
GO:0048509	IEA	PLAZA Integrative Orthology	regulation of meristem development	AT2G01830
GO:0008272	IEA	PLAZA Integrative Orthology	sulfate transport	AT2G01830
GO:0016036	IEA	PLAZA Integrative Orthology	cellular response to phosphate starvation	AT2G01830
GO:0071215	IEA	PLAZA Integrative Orthology	cellular response to abscisic acid stimulus	AT5G35750
GO:0009909	IEA	PLAZA Integrative Orthology	regulation of flower development	AT5G35750
GO:0009414	IEA	PLAZA Integrative Orthology	response to water deprivation	AT2G01830
GO:0080117	IEA	PLAZA Integrative Orthology	secondary growth	AT5G35750
GO:0009636	IEA	PLAZA Integrative Orthology	response to toxic substance	AT5G35750
GO:0048831	IEA	PLAZA Integrative Orthology	regulation of shoot system development	AT2G01830
GO:0007231	IEA	PLAZA Integrative Orthology	osmosensory signaling pathway	AT2G01830
GO:0009651	IEA	PLAZA Integrative Orthology	response to salt stress	AT5G35750
GO:0010087	IEA	PLAZA Integrative Orthology	phloem or xylem histogenesis	AT5G35750
GO:0010086	IEA	PLAZA Integrative Orthology	embryonic root morphogenesis	AT2G01830

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0000155	IDA, IEA,	UniProt	phosphorelay sensor kinase activity
GO:0016772	IEA	InterPro	transferase activity, transferring phosphorus-containing groups
GO:0019955	IDA	UniProt	cytokine binding
GO:0004673	IDA	UniProt	protein histidine kinase activity
GO:0019899	IEA	PLAZA Integrative Orthology	enzyme binding	AT2G01830
GO:0005515	IEA	PLAZA Integrative Orthology	protein binding	AT2G01830
GO:0004721	IEA	PLAZA Integrative Orthology	phosphoprotein phosphatase activity	AT2G01830
GO:0009884	IEA	PLAZA Integrative Orthology	cytokinin receptor activity	AT2G01830
GO:0009885	IEA	PLAZA Integrative Orthology	transmembrane histidine kinase cytokinin receptor activity	AT2G01830
GO:0042802	IEA	PLAZA Integrative Orthology	identical protein binding	AT5G35750
GO:0019901	IEA	PLAZA Integrative Orthology	protein kinase binding	AT2G01830
GO:0019900	IEA	PLAZA Integrative Orthology	kinase binding	AT5G35750
GO:0043424	IEA	PLAZA Integrative Orthology	protein histidine kinase binding	AT2G01830
GO:0005034	IEA	PLAZA Integrative Orthology	osmosensor activity	AT2G01830

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016021	IEA	UniProt	integral component of membrane
GO:0005622	IEA	UniProt	intracellular
GO:0005886	IEA	UniProt	plasma membrane
GO:0005783	IEA	PLAZA Integrative Orthology	endoplasmic reticulum	AT2G01830

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003594	Histidine kinase-like ATPase, C-terminal domain
IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR006189	CHASE domain
IPR001789	Signal transduction response regulator, receiver domain
IPR004358	Signal transduction histidine kinase-related protein, C-terminal
IPR005467	Histidine kinase domain
IPR011006	CheY-like superfamily

Mapman id	Description
11.4.2.1	.Phytohormone action.cytokinin.perception and signal transduction.receptor protein (AHK)

No SignalP domains detected for this gene.