Gene: LOC_Os03g48590 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os03g48590
Transcript Identifier
LOC_Os03g48590.1
Gene Type
Coding gene
Location
Chr3 : 27703123-27704635 : negative

Family

Gene family
HOM04M001221
(118 genes in 29 species)
specific family
Subfamily
ORTHO04M001992
(80 genes in 29 species)
specific family

Descriptions

Description
protein transport protein Sec61 subunit alpha, putative, expressed

Identifiers

Type Value
idLOC_Os03g48590.MSUv7.0
pacid33132315
tidLOC_Os03g48590.1.MSUv7.0
tidLOC_Os03g48590.1
RAPOs03g0692300

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015031 IEAUniProtprotein transport

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 RCA, IEAGene OntologymembraneGR_REF:8210
GO:0016021 IEAUniProtintegral component of membrane
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G29310
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT1G78720
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT1G29310
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G29310

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002208SecY/SEC61-alpha family
IPR019561Translocon Sec61/SecY, plug domain
IPR030659SecY conserved site
IPR023201SecY subunit domain

Mapman id Description
23.3.1.3.1.Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.subunit alpha
No SignalP domains detected for this gene.