Gene: LOC_Os03g47770 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os03g47770
Transcript Identifier
LOC_Os03g47770.1
Gene Type
Coding gene
Location
Chr3 : 27111729-27116363 : negative

Family

Gene family
HOM04M000061
(1235 genes in 29 species)
specific family
Subfamily
ORTHO04M002269
(74 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
ubiquitin-conjugating enzyme E2 W, putative, expressed

Identifiers

Type Value
idLOC_Os03g47770.MSUv7.0
pacid33133521
tidLOC_Os03g47770.1.MSUv7.0
tidLOC_Os03g47770.1
RAPOs03g0681400

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006464 RCAGene Ontologycellular protein modification processGR_REF:8030
GO:0016579 RCAGene Ontologyprotein deubiquitinationGR_REF:8030
GO:0043161 IBAUniProtproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209 IBAUniProtprotein polyubiquitination
GO:0016567 IEAPLAZA Integrative Orthologyprotein ubiquitinationAT1G45050
GO:0006511 IEAPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G75440
GO:0009965 IEAPLAZA Integrative Orthologyleaf morphogenesisAT1G45050
GO:0009910 IEAPLAZA Integrative Orthologynegative regulation of flower developmentAT1G45050
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT4G36410

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 RCAGene Ontologyubiquitin-protein transferase activityGR_REF:8030
GO:0061630 IBAUniProtubiquitin protein ligase activity
GO:0031625 IBAUniProtubiquitin protein ligase binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IBAUniProtcytoplasm
GO:0005634 IBAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000608Ubiquitin-conjugating enzyme E2
IPR016135Ubiquitin-conjugating enzyme/RWD-like

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.