Gene: LOC_Os03g46190 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os03g46190
Transcript Identifier
LOC_Os03g46190.2
Gene Type
Coding gene
Location
Chr3 : 26117820-26119665 : negative

Family

Gene family
HOM04M005096
(38 genes in 27 species)
specific family

Descriptions

Description
parafibromin, putative, expressed

Identifiers

Type Value
idLOC_Os03g46190.MSUv7.0
pacid33132145
tidLOC_Os03g46190.2.MSUv7.0
tidLOC_Os03g46190.2
RAPOs03g0664700

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006368 IEAUniProttranscription elongation from RNA polymerase II promoter
GO:0016570 IBA, IEAUniProthistone modification
GO:0051568 IEAUniProthistone H3-K4 methylation
GO:0009911 IEAUniProtpositive regulation of flower development
GO:0032968 IBAUniProtpositive regulation of transcription elongation from RNA polymerase II promoter
GO:0034402 IBAUniProtrecruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex
GO:0010228 IEAUniProtvegetative to reproductive phase transition of meristem

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000993 IBAUniProtRNA polymerase II core binding
GO:0001076 IBAUniProttranscription factor activity, RNA polymerase II transcription factor binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G22590

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016593 IBA, IEAUniProtCdc73/Paf1 complex
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G22590

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007852Cdc73/Parafibromin
IPR031336Cell division control protein 73, C-terminal
IPR032041Paf1 complex subunit Cdc73, N-terminal domain

Mapman id Description
15.3.6.1.5.RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component CDC73/PHP
No SignalP domains detected for this gene.