Gene: LOC_Os03g28940 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os03g28940
Transcript Identifier
LOC_Os03g28940.1
Gene Type
Coding gene
Location
Chr3 : 16408033-16409854 : negative

Family

Gene family
HOM04M000581
(213 genes in 24 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
ZIM domain containing protein, putative, expressed

Identifiers

Type Value
idLOC_Os03g28940.MSUv7.0
pacid33133337
tidLOC_Os03g28940.1.MSUv7.0
tidLOC_Os03g28940.1
RAPOs03g0402800

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:1903507 IBAUniProtnegative regulation of nucleic acid-templated transcription
GO:0031347 IBAUniProtregulation of defense response
GO:2000022 IBAUniProtregulation of jasmonic acid mediated signaling pathway
GO:0006355 IEAUniProtregulation of transcription, DNA-templated
GO:0009611 IBAUniProtresponse to wounding
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0009908 IEAPLAZA Tree-based Orthologyflower developmentAT1G19180
GO:1900067 IEAPLAZA Tree-based Orthologyregulation of cellular response to alkaline pHAT1G19180
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT1G74950
GO:0009555 IEAPLAZA Tree-based Orthologypollen developmentAT1G19180
GO:0009867 IEAPLAZA Tree-based Orthologyjasmonic acid mediated signaling pathwayAT1G19180
GO:0042742 IEAPLAZA Tree-based Orthologydefense response to bacteriumAT1G19180

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003714 IBAUniProttranscription corepressor activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G74950

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR010399Tify domain
IPR018467CO/COL/TOC1, conserved site

Mapman id Description
11.7.2.1.2.Phytohormone action.jasmonic acid.perception and signal transduction.receptor complex.component JAZ
15.5.45.RNA biosynthesis.transcriptional regulation.transcription factor (TIFY)
No SignalP domains detected for this gene.