Gene: LOC_Os03g26440 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os03g26440
Transcript Identifier
LOC_Os03g26440.1
Gene Type
Coding gene
Location
Chr3 : 15106637-15113611 : positive

Family

Gene family
HOM04M005733
(35 genes in 28 species)
specific family

Descriptions

Description
tRNA pseudouridine synthase family protein, putative, expressed

Identifiers

Type Value
idLOC_Os03g26440.MSUv7.0
pacid33130960
tidLOC_Os03g26440.1.MSUv7.0
tidLOC_Os03g26440.1
RAPOs03g0381100

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0001522 IEAInterPropseudouridine synthesis
GO:0009451 IEAInterProRNA modification
GO:1990481 IBAUniProtmRNA pseudouridine synthesis
GO:0031119 IBAUniProttRNA pseudouridine synthesis

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAUniProtRNA binding
GO:0009982 IBA, IEAUniProtpseudouridine synthase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IBAUniProtcytoplasm
GO:0005634 IBAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR020095Pseudouridine synthase I, TruA, C-terminal
IPR001406Pseudouridine synthase I, TruA
IPR020097Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103Pseudouridine synthase, catalytic domain

Mapman id Description
16.6.3.1.RNA processing.tRNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)
No SignalP domains detected for this gene.