Gene: LOC_Os03g25390 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os03g25390
Transcript Identifier
LOC_Os03g25390.1
Gene Type
Coding gene
Location
Chr3 : 14514474-14518181 : negative

Family

Gene family
HOM04M001580
(95 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
novel plant SNARE 11, putative, expressed

Identifiers

Type Value
idLOC_Os03g25390.MSUv7.0
pacid33129537
tidLOC_Os03g25390.1.MSUv7.0
tidLOC_Os03g25390.1
RAPOs03g0369800

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006888 IBAUniProtER to Golgi vesicle-mediated transport
GO:0006896 IBAUniProtGolgi to vacuole transport
GO:0006891 IBAUniProtintra-Golgi vesicle-mediated transport
GO:0006623 IBAUniProtprotein targeting to vacuole
GO:0042147 IBAUniProtretrograde transport, endosome to Golgi
GO:0048280 IBAUniProtvesicle fusion with Golgi apparatus
GO:0000911 IEAPLAZA Integrative Orthologycytokinesis by cell plate formationAT2G35190

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005484 IBAUniProtSNAP receptor activity
GO:0000149 IBAUniProtSNARE binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAUniProtcytosol
GO:0005789 IBAUniProtendoplasmic reticulum membrane
GO:0012507 IBAUniProtER to Golgi transport vesicle membrane
GO:0005794 IBAUniProtGolgi apparatus
GO:0016021 IEAUniProtintegral component of membrane
GO:0031902 IBAUniProtlate endosome membrane
GO:0031201 IBAUniProtSNARE complex
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G48240
GO:0009504 IEAPLAZA Integrative Orthologycell plateAT2G35190
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G48240

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005606Sec20
IPR000727Target SNARE coiled-coil homology domain

Mapman id Description
22.7.2.4.Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.NPSN-group component
No SignalP domains detected for this gene.