Gene: LOC_Os03g23935 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os03g23935
Transcript Identifier
LOC_Os03g23935.1
Gene Type
Coding gene
Location
Chr3 : 13571003-13574638 : positive

Family

Gene family
HOM04M003273
(52 genes in 29 species)
specific family

Descriptions

Description
WD domain, G-beta repeat domain containing protein, expressed

Identifiers

Type Value
idLOC_Os03g23935.MSUv7.0
pacid33127173
tidLOC_Os03g23935.1.MSUv7.0
tidLOC_Os03g23935.1
RAPOs03g0355200

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009617 IEAPLAZA Integrative Orthologyresponse to bacteriumAT2G41500
GO:0009560 IEAPLAZA Integrative Orthologyembryo sac egg cell differentiationAT2G41500
GO:0007267 IEAPLAZA Integrative Orthologycell-cell signalingAT2G41500
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT2G41500
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT2G41500
GO:0000304 IEAPLAZA Integrative Orthologyresponse to singlet oxygenAT2G41500
GO:0009553 IEAPLAZA Integrative Orthologyembryo sac developmentAT2G41500
GO:0080027 IEAPLAZA Integrative Orthologyresponse to herbivoreAT2G41500
GO:0016102 IEAPLAZA Integrative Orthologyditerpenoid biosynthetic processAT2G41500
GO:0001709 IEAPLAZA Integrative Orthologycell fate determinationAT2G41500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0080013 IEAPLAZA Integrative Orthology(E,E)-geranyllinalool synthase activityAT2G41500

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016607 IEAPLAZA Integrative Orthologynuclear speckAT2G41500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR014906Pre-mRNA processing factor 4 (PRP4)-like
IPR001680WD40 repeat
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
16.4.1.3.2.RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF4)
No SignalP domains detected for this gene.