Gene: LOC_Os03g21980 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os03g21980
Transcript Identifier
LOC_Os03g21980.2
Gene Type
Coding gene
Location
Chr3 : 12592026-12594480 : negative

Family

Gene family
HOM04M005569
(36 genes in 28 species)
specific family

Descriptions

Description
tRNA pseudouridine synthase family protein, putative, expressed

Identifiers

Type Value
idLOC_Os03g21980.MSUv7.0
pacid33127181
tidLOC_Os03g21980.2.MSUv7.0
tidLOC_Os03g21980.2
RAPOs03g0338600

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0001522 IEAUniProtpseudouridine synthesis
GO:0009451 IEAInterProRNA modification
GO:0008033 IEAUniProttRNA processing
GO:0031119 IBAUniProttRNA pseudouridine synthesis

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAUniProtRNA binding
GO:0009982 IBA, IEAUniProtpseudouridine synthase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 RCAGene OntologymitochondrionGR_REF:7047

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR020095Pseudouridine synthase I, TruA, C-terminal
IPR001406Pseudouridine synthase I, TruA
IPR020097Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103Pseudouridine synthase, catalytic domain

Mapman id Description
16.6.3.1.RNA processing.tRNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)
No SignalP domains detected for this gene.